ywhC [2019-07-02 08:15:12]

similar to site-2 protease

locus: BSU37530

pI: 9.74

mw: 24.56 kDa

protein length: 219 aa

gene length: 660 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,852,718 3,853,377

The protein

Protein family

• peptidase M50B family (according to Swiss-Prot)

Structure

• [PDB|3B4R] (from Methanocaldococcus jannaschii, corresponds to aa 15 ... 166, 30% identity) [pubmed|18063795]

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|7CBBC3649B7E37AC33A018C23085748AA6CA1121|ywhC]-[gene|52EB06F920EC02FD32FDE18DD4202E30D5EC8262|ywhD]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-A518 (ywhC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/518 NBRP B. subtilis, Japan]
• BKE37530 ([gene|7CBBC3649B7E37AC33A018C23085748AA6CA1121|ywhC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE37530 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGTGAGATATCCCTCTTT, downstream forward: _UP4_CCGCTTTTGTAGGAGGTAGA
• BKK37530 ([gene|7CBBC3649B7E37AC33A018C23085748AA6CA1121|ywhC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK37530 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGTGAGATATCCCTCTTT, downstream forward: _UP4_CCGCTTTTGTAGGAGGTAGA

References

Research papers

• 18063795